BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB016A02LP1|AL426930
(858 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1793 1081 0.0
>3x_Contig1793
Length = 40499
Score = 1081 bits (543), Expect = 0.0
Identities = 544/545 (99%)
Strand = Plus / Plus
Query: 1 atggttccagtaacgaacaaaccatcttcagcgcggaaggtattgctattgaggccacgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 33500 atggttccagtaacgaacaaaccatcttcagcgcggaaggtattgctattgaggccacgg 33559
Query: 61 agtatcttgagatcgaggatctagaaaaagatgtagaacctacgttaaggttcccaaaac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 33560 agtatcttgagatcgaggatctagaaaaagatgtagaacctacgttaaggttcccaaaac 33619
Query: 121 cgggatgggtcgaatgtaaaccaatgaacattttggaaaacgtggttcaatgtttcgcag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 33620 cgggatgggtcgaatgtaaaccaatgaacattttggaaaacgtggttcaatgtttcgcag 33679
Query: 181 caaacttgattacaatggatcgcgtaaacggcgatagagtctctaatggtctaccgcctt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 33680 caaacttgattacaatggatcgcgtaaacggcgatagagtctctaatggtctaccgcctt 33739
Query: 241 atcgcatcaagtgcataggtattgctaacatgagagaaacaactttagtatggtcaaaga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 33740 atcgcatcaagtgcataggtattgctaacatgagagaaacaactttagtatggtcaaaga 33799
Query: 301 agaccgggaaacctttaatcgattacggtattgtatggaacgatgttagaaccacagaga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 33800 agaccgggaaacctttaatcgattacggtattgtatggaacgatgttagaaccacagaga 33859
Query: 361 tagttcaaaagaaaaaagatgagacaccagaagagtaccaagaacatttaagggaattaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 33860 tagttcaaaagaaaaaagatgagacaccagaagagtaccaagaacatttaagggaattaa 33919
Query: 421 ctggattaccattgttctctacatatttctcctgttccaaacttcgctggttattagata 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 33920 ctggattaccattgttctctacatatttctcctgttccaaacttcgctggttattagata 33979
Query: 481 atatccctgaagttaccaaagcttacgaagaaaatgatttggtcttcggcactgtcgama 540
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 33980 atatccctgaagttaccaaagcttacgaagaaaatgatttggtcttcggcactgtcgaca 34039
Query: 541 cctgg 545
|||||
Sbjct: 34040 cctgg 34044
Score = 566 bits (284), Expect = e-161
Identities = 292/294 (99%), Gaps = 1/294 (0%)
Strand = Plus / Plus
Query: 566 ccacaacaatgttttagttaccgatgtcactaatgcttgcaggacagggttcatgaattt 625
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 34062 ccacaacaatgttttagttaccgatgtcactaatgcttgcaggacagggttcatgaattt 34121
Query: 626 aaatactaaggattacgacgatgaattgctcgattattggaacatcgacaaggcaaagat 685
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 34122 aaatactaaggattacgacgatgaattgctcgattattggaacatcgacaaggcaaagat 34181
Query: 686 tcatttgccaaagattgtttcaagttctgagtactacggtaattttgtagttccagaatg 745
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 34182 tcatttgccaaagattgtttcaagttctgagtactacggtaattttgtagttccagaatg 34241
Query: 746 taccaagaaatctttgacgtccacagcatgggatcttctatcagcattttcgcaaagagt 805
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 34242 taccaagaaatctttgacgtccacagcatgggatcttctatcagcattttcgcaaagagt 34301
Query: 806 tcctccagtgccaatacaaggttgtcttggtga-cmaagcgcatctttggtggg 858
||||||||||||||||||||||||||||||||| | ||||||||||||||||||
Sbjct: 34302 tcctccagtgccaatacaaggttgtcttggtgaccaaagcgcatctttggtggg 34355
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6176
Number of Sequences: 1807
Number of extensions: 6176
Number of successful extensions: 30
Number of sequences better than 1.0e-20: 1
length of query: 858
length of database: 10,358,551
effective HSP length: 16
effective length of query: 842
effective length of database: 10,329,639
effective search space: 8697556038
effective search space used: 8697556038
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.1 bits)